Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-coa--3-ketoacid-coa transferase | BKM63_05615 | Not Available | Negative | 1236839 - 1237492 | 23331.6 |
| succinyl-coa--3-ketoacid-coa transferase | BKM63_05620 | Not Available | Negative | 1237583 - 1238284 | 25489.0 |
| penicillin-binding protein | BKM63_05625 | Not Available | Negative | 1238620 - 1240926 | 87092.1 |
| gliding motility lipoprotein gldh | BKM63_05630 | Not Available | Negative | 1240939 - 1241418 | 18067.8 |
| hypothetical protein | BKM63_05635 | Not Available | Negative | 1241402 - 1242769 | 51211.6 |
| hypothetical protein | BKM63_05640 | Not Available | Positive | 1243129 - 1244310 | 44251.1 |
| hypothetical protein | BKM63_05645 | Not Available | Positive | 1244338 - 1245681 | 49182.3 |
| hypothetical protein | BKM63_05650 | Not Available | Positive | 1245701 - 1246240 | 20235.1 |
| 4fe-4s ferredoxin | BKM63_05655 | Not Available | Negative | 1246311 - 1246541 | 8482.5 |
| collagenase | BKM63_05660 | Not Available | Negative | 1246541 - 1247782 | 46197.2 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
