Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate phosphoribosyltransferase | BKM63_00485 | Not Available | Positive | 113897 - 114889 | 35887.5 |
| indole-3-glycerol phosphate synthase | BKM63_00490 | Not Available | Positive | 114977 - 115756 | 28562.6 |
| n-(5'-phosphoribosyl)anthranilate isomerase | BKM63_00495 | Not Available | Positive | 115858 - 116490 | 23989.1 |
| tryptophan synthase subunit beta | BKM63_00500 | Not Available | Positive | 116503 - 117684 | 43099.6 |
| gamma-glutamylcyclotransferase | BKM63_00505 | Not Available | Positive | 117808 - 118125 | 12017.5 |
| carbon-nitrogen hydrolase family protein | BKM63_00510 | Not Available | Positive | 118144 - 118881 | 27435.3 |
| tryptophan synthase subunit alpha | BKM63_00515 | Not Available | Positive | 119119 - 119880 | 28060.7 |
| tetr family transcriptional regulator | BKM63_00520 | Not Available | Positive | 120053 - 120682 | 24242.6 |
| transporter | BKM63_00525 | Not Available | Positive | 120672 - 121991 | 48788.1 |
| secretion protein hlyd | BKM63_00530 | Not Available | Positive | 122004 - 123083 | 39967.8 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
