Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | BKM63_05035 | Not Available | Negative | 1092936 - 1094003 | 39610.7 |
| glycosyl hydrolase | BKM63_05040 | Not Available | Negative | 1094446 - 1096683 | 81865.9 |
| glycoside hydrolase | BKM63_05045 | Not Available | Negative | 1096827 - 1098398 | 59565.5 |
| alpha-glucosidase | BKM63_05050 | Not Available | Negative | 1098485 - 1100491 | 75830.1 |
| alpha-xylosidase | BKM63_05055 | Not Available | Negative | 1100929 - 1103328 | 91455.2 |
| glycoside hydrolase | BKM63_05060 | Not Available | Negative | 1103619 - 1106114 | 93885.1 |
| hypothetical protein | BKM63_05065 | Not Available | Negative | 1106194 - 1107561 | 50270.9 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_05070 | Not Available | Negative | 1107584 - 1109158 | 58716.9 |
| susc/raga family tonb-linked outer membrane protein | BKM63_05075 | Not Available | Negative | 1109170 - 1112301 | 114342.0 |
| nudix hydrolase | BKM63_05080 | Not Available | Positive | 1112799 - 1113515 | 27407.0 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
