Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylpyrophosphate synthetase | BKM63_04935 | Not Available | Negative | 1067518 - 1068351 | 30811.3 |
| nudix hydrolase | BKM63_04940 | Not Available | Negative | 1068426 - 1069118 | 26814.1 |
| pkd domain-containing protein | BKM63_04945 | Not Available | Negative | 1069229 - 1069600 | 13046.4 |
| lysr family transcriptional regulator | BKM63_04950 | Not Available | Negative | 1069668 - 1070573 | 34964.1 |
| type 1 glutamine amidotransferase domain-containing protein | BKM63_04955 | Not Available | Positive | 1070660 - 1071421 | 27360.8 |
| nadh-dependent alcohol dehydrogenase | BKM63_04960 | Not Available | Positive | 1071584 - 1072741 | 42524.4 |
| hypothetical protein | BKM63_04965 | Not Available | Negative | 1072976 - 1075468 | 96635.5 |
| glycerol-3-phosphate dehydrogenase | BKM63_04970 | Not Available | Positive | 1075660 - 1076655 | 36741.6 |
| hypothetical protein | BKM63_04975 | Not Available | Positive | 1077019 - 1079694 | 100312.0 |
| hypothetical protein | BKM63_04980 | Not Available | Positive | 1079706 - 1081016 | 47332.6 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
