Shigella boydii

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella boydii is a Gram-negative, rod-shaped bacterium characterized by its non-motility and the presence of true flagella. This microbe typically exists in pairs or as single cells and is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. As a chemoorganotroph, S. boydii derives energy from organic compounds, with an optimal growth temperature of 37°C, placing it within the mesophilic temperature classification. The organism is associated with host environments, indicating a close relationship with its biological hosts while also exhibiting free-living characteristics. Notably, S. boydii contains two cellular membranes, which is typical for Gram-negative bacteria, and possesses four replicons in its genome, reflecting a complex genetic structure. The genome of S. boydii is accessible through multiple accession numbers, indicating its availability for further scientific exploration. The ecological role of Shigella boydii may involve interactions within host organisms, potentially influencing microbial communities and contributing to nutrient cycling in host-associated habitats. Its adaptation to both free-living and host-associated lifestyles suggests a versatile ecological strategy, which may play a significant role in its survival and proliferation in variable environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella boydii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella boydii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella boydii strain NCTC8576 genome assembly, contig:

Gene Summary

Adenine Count

1225489 bp

Thymine Count

1222375 bp

Guanine Count

1264693 bp

Cytosine Count

1292857 bp

Genome Length

5005414 bp

Protein-coding Genes

4707 genes

Non-Coding Genes

659 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mgta regulatory leader peptide mgtlC5K23_10415Not AvailablePositive1655374 - 16554272094.63
magnesium-translocating p-type atpaseC5K23_10420Not AvailablePositive1655568 - 165826499488.3
reactive intermediate/imine deaminaseC5K23_10425Not AvailableNegative1658470 - 165885613626.4
aspartate carbamoyltransferase regulatory subunitC5K23_10430Not AvailableNegative1658929 - 165939017121.6
aspartate carbamoyltransferase catalytic subunitC5K23_10435Not AvailableNegative1659403 - 166033834429.3
pyrbi operon leader peptideC5K23_10440Not AvailableNegative1660342 - 16604765098.43
rida family proteinC5K23_10445Not AvailableNegative1660756 - 166115114577.1
sdr family nad(p)-dependent oxidoreductaseC5K23_10450Not AvailableNegative1661282 - 166199524652.6
tetr/acrr family transcriptional regulatorC5K23_10455Not AvailablePositive1662066 - 166265921399.6
yhch/yjgk/yial family proteinC5K23_10460Not AvailablePositive1662845 - 166329716898.4

Displaying genes 7441 – 7450 of 20834 in total

Pathways

1 pathway

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ShigellosisCausesPMC5177732

Displaying health effects 1 – 1 of 1 in total