Shigella boydii

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella boydii is a Gram-negative, rod-shaped bacterium characterized by its non-motility and the presence of true flagella. This microbe typically exists in pairs or as single cells and is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. As a chemoorganotroph, S. boydii derives energy from organic compounds, with an optimal growth temperature of 37°C, placing it within the mesophilic temperature classification. The organism is associated with host environments, indicating a close relationship with its biological hosts while also exhibiting free-living characteristics. Notably, S. boydii contains two cellular membranes, which is typical for Gram-negative bacteria, and possesses four replicons in its genome, reflecting a complex genetic structure. The genome of S. boydii is accessible through multiple accession numbers, indicating its availability for further scientific exploration. The ecological role of Shigella boydii may involve interactions within host organisms, potentially influencing microbial communities and contributing to nutrient cycling in host-associated habitats. Its adaptation to both free-living and host-associated lifestyles suggests a versatile ecological strategy, which may play a significant role in its survival and proliferation in variable environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella boydii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella boydii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella boydii strain NCTC8576 genome assembly, contig:

Gene Summary

Adenine Count

1225489 bp

Thymine Count

1222375 bp

Guanine Count

1264693 bp

Cytosine Count

1292857 bp

Genome Length

5005414 bp

Protein-coding Genes

4707 genes

Non-Coding Genes

659 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gdp-mannose mannosyl hydrolaseNCTC8576_04366Not AvailableNegative4009362 - 400984418371.7
putative nucleotide di-p-sugar epimerase or dehydrataseNCTC8576_04367Not AvailableNegative4009844 - 401080936157.2
gdp-mannose 4,6-dehydrataseNCTC8576_04368Not AvailableNegative4010812 - 401193342048.2
putative colanic acid biosynthesis acetyltransferase wcafNCTC8576_04369Not AvailableNegative4011959 - 401250719963.2
putative glycosyl transferaseNCTC8576_04370Not AvailableNegative4012523 - 401326927842.4
putative colanic acid biosynthesis proteinNCTC8576_04371Not AvailableNegative4013280 - 401449745393.1
putative glycosyl transferaseNCTC8576_04372Not AvailableNegative4014472 - 401568945316.6
putative colanic acid biosynthesis acetyltransferase wcabNCTC8576_04373Not AvailableNegative4015686 - 401617417616.6
glycosyl transferase family proteinNCTC8576_04374Not AvailableNegative4016177 - 401701633050.5
tyrosine kinaseNCTC8576_04375Not AvailableNegative4017109 - 401927179347.7

Displaying genes 4461 – 4470 of 20834 in total

Pathways

1 pathway

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ShigellosisCausesPMC5177732

Displaying health effects 1 – 1 of 1 in total