Shigella boydii

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella boydii is a Gram-negative, rod-shaped bacterium characterized by its non-motility and the presence of true flagella. This microbe typically exists in pairs or as single cells and is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. As a chemoorganotroph, S. boydii derives energy from organic compounds, with an optimal growth temperature of 37°C, placing it within the mesophilic temperature classification. The organism is associated with host environments, indicating a close relationship with its biological hosts while also exhibiting free-living characteristics. Notably, S. boydii contains two cellular membranes, which is typical for Gram-negative bacteria, and possesses four replicons in its genome, reflecting a complex genetic structure. The genome of S. boydii is accessible through multiple accession numbers, indicating its availability for further scientific exploration. The ecological role of Shigella boydii may involve interactions within host organisms, potentially influencing microbial communities and contributing to nutrient cycling in host-associated habitats. Its adaptation to both free-living and host-associated lifestyles suggests a versatile ecological strategy, which may play a significant role in its survival and proliferation in variable environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella boydii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella boydii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella boydii strain NCTC8576 genome assembly, contig:

Gene Summary

Adenine Count

1225489 bp

Thymine Count

1222375 bp

Guanine Count

1264693 bp

Cytosine Count

1292857 bp

Genome Length

5005414 bp

Protein-coding Genes

4707 genes

Non-Coding Genes

659 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator mlraNCTC8576_04240Not AvailablePositive3907403 - 390813428266.2
phage proteinNCTC8576_04241Not AvailablePositive3908355 - 390875915830.0
isocitrate dehydrogenaseNCTC8576_04242Not AvailableNegative3909843 - 391109345787.4
23s rrna pseudouridine synthase eNCTC8576_04243Not AvailablePositive3911265 - 391191824866.8
hydrolase, nudix familyNCTC8576_04244Not AvailablePositive3911928 - 391238917505.9
putative trna(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the pp-loop atpase domainNCTC8576_04245Not AvailablePositive3912443 - 391354940960.7
protein ycfcNCTC8576_04246Not AvailablePositive3913585 - 391422622918.0
adenylosuccinate lyaseNCTC8576_04247Not AvailablePositive3914230 - 391560051572.7
dna-binding transcriptional regulator phopNCTC8576_04248Not AvailablePositive3915768 - 391643925536.7
sensor protein phoqNCTC8576_04249Not AvailablePositive3916439 - 391789955302.8

Displaying genes 4401 – 4410 of 20834 in total

Pathways

1 pathway

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ShigellosisCausesPMC5177732

Displaying health effects 1 – 1 of 1 in total