Shigella boydii

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Shigella

Description

Shigella boydii is a Gram-negative, rod-shaped bacterium characterized by its non-motility and the presence of true flagella. This microbe typically exists in pairs or as single cells and is classified as a facultative anaerobe, allowing it to thrive in both aerobic and anaerobic environments. As a chemoorganotroph, S. boydii derives energy from organic compounds, with an optimal growth temperature of 37°C, placing it within the mesophilic temperature classification. The organism is associated with host environments, indicating a close relationship with its biological hosts while also exhibiting free-living characteristics. Notably, S. boydii contains two cellular membranes, which is typical for Gram-negative bacteria, and possesses four replicons in its genome, reflecting a complex genetic structure. The genome of S. boydii is accessible through multiple accession numbers, indicating its availability for further scientific exploration. The ecological role of Shigella boydii may involve interactions within host organisms, potentially influencing microbial communities and contributing to nutrient cycling in host-associated habitats. Its adaptation to both free-living and host-associated lifestyles suggests a versatile ecological strategy, which may play a significant role in its survival and proliferation in variable environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusShigella
SpeciesShigella boydii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Shigella boydii
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityNot Available

Genome Summary

Shigella boydii strain NCTC8576 genome assembly, contig:

Gene Summary

Adenine Count

1225489 bp

Thymine Count

1222375 bp

Guanine Count

1264693 bp

Cytosine Count

1292857 bp

Genome Length

5005414 bp

Protein-coding Genes

4707 genes

Non-Coding Genes

659 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
porinUQ76_21915Not AvailableNegative4102009 - 410318742619.7
permeaseUQ76_21920Not AvailablePositive4103754 - 410411913838.9
phosphohydrolaseUQ76_21925Not AvailablePositive4104159 - 410485426000.8
bifunctional glutathionylspermidine amidase/synthaseUQ76_21930Not AvailableNegative4105111 - 410697070453.6
glutathione-dependent disulfide-bond oxidoreductaseUQ76_21935Not AvailablePositive4107175 - 410804132415.4
hydrogenase maturation factor hybgUQ76_21940Not AvailableNegative4108164 - 41084128793.7
hydrogenase maturation nickel metallochaperone hypaUQ76_21945Not AvailableNegative4108546 - 410888712683.2
hydrogenase-2 assembly chaperoneUQ76_21950Not AvailableNegative4108880 - 410936817954.6
hyad/hybd family hydrogenase maturation endopeptidaseUQ76_21955Not AvailableNegative4109361 - 410985517781.9
hydrogenase 2 large subunitUQ76_21960Not AvailableNegative4109855 - 41099342618.16

Displaying genes 19891 – 19900 of 20834 in total

Pathways

1 pathway

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
ShigellosisCausesPMC5177732

Displaying health effects 1 – 1 of 1 in total