Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail sheath protein | BED45_14505 | Not Available | Positive | 1068732 - 1069919 | 42780.6 |
| Tail tube protein | BED45_14510 | Not Available | Positive | 1069932 - 1070450 | 18676.3 |
| Tail protein | BED45_14515 | Not Available | Positive | 1070513 - 1070794 | 9749.0 |
| Tail length determinator | BED45_14520 | Not Available | Positive | 1070939 - 1073368 | 85232.1 |
| Tail protein | BED45_14525 | Not Available | Positive | 1073380 - 1073844 | 16827.2 |
| Tail protein | BED45_14530 | Not Available | Positive | 1073847 - 1075040 | 43175.4 |
| Attr | Not Available | Not Available | Positive | 1075433 - 1075445 | Not Available |
| Pyruvate formate-lyase | BED45_14535 | Not Available | Negative | 1075633 - 1077915 | 85014.4 |
| Phage-tail assembly-like protein | BED45_17850 | Not Available | Negative | 2224561 - 2225100 | 19111.6 |
| Lytic enzyme (putative glycohydrolase) | BED45_17855 | Not Available | Negative | 2225097 - 2225714 | 22482.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

