Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle-docking protein ftsy | BED45_11595 | Not Available | Positive | 385790 - 387316 | 55893.9 |
| cell division atp-binding protein ftse | BED45_11600 | Not Available | Positive | 387319 - 387987 | 24371.7 |
| cell division protein ftsx | BED45_11605 | Not Available | Positive | 387980 - 389038 | 38549.9 |
| rna polymerase factor sigma-32 | BED45_11610 | Not Available | Positive | 389294 - 390148 | 32515.7 |
| leucine abc transporter subunit substrate-binding protein livk | BED45_11615 | Not Available | Positive | 390404 - 391522 | 39664.4 |
| gnat family n-acetyltransferase | BED45_11620 | Not Available | Negative | 391717 - 392100 | 14470.1 |
| leucine abc transporter subunit substrate-binding protein livk | BED45_11625 | Not Available | Positive | 392524 - 393633 | 39534.3 |
| branched-chain amino acid abc transporter permease livh | BED45_11630 | Not Available | Positive | 393695 - 394621 | 32953.3 |
| high-affinity branched-chain amino acid abc transporter permease livm | BED45_11635 | Not Available | Positive | 394618 - 395895 | 46371.1 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livg | BED45_11640 | Not Available | Positive | 395892 - 396659 | 28437.7 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

