Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt abc transporter permease | BED45_11330 | Not Available | Positive | 325228 - 325935 | 26489.1 |
| cobalt abc transporter atp-binding protein | BED45_11335 | Not Available | Positive | 325923 - 326600 | 24848.9 |
| abc transporter atp-binding protein | BED45_11340 | Not Available | Positive | 326594 - 327244 | 23975.9 |
| transketolase | BED45_11345 | Not Available | Negative | 327304 - 329295 | 71974.3 |
| metalloprotease | BED45_11350 | Not Available | Positive | 329575 - 330333 | 26599.6 |
| agmatinase | BED45_11355 | Not Available | Negative | 330436 - 331356 | 33577.9 |
| arginine decarboxylase | BED45_11360 | Not Available | Negative | 331594 - 333492 | 71181.3 |
| methionine adenosyltransferase | BED45_11365 | Not Available | Positive | 334358 - 335512 | 41902.9 |
| d-galactose transporter galp | BED45_11370 | Not Available | Positive | 335912 - 337306 | 50933.6 |
| sprt family protein | BED45_11375 | Not Available | Positive | 337384 - 337881 | 19390.7 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

