Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa hydrolase | BED45_11280 | Not Available | Positive | 315264 - 316730 | 52983.5 |
| lysr family transcriptional regulator | BED45_11285 | Not Available | Negative | 316727 - 317623 | 34368.4 |
| oxidative stress defense protein | BED45_11290 | Not Available | Negative | 317747 - 318493 | 26630.6 |
| arginine transporter | BED45_11295 | Not Available | Negative | 318587 - 319222 | 23195.1 |
| mechanosensitive ion channel protein mscs | BED45_11300 | Not Available | Negative | 319373 - 320233 | 31156.2 |
| class ii fructose-bisphosphate aldolase | BED45_11305 | Not Available | Negative | 320425 - 321504 | 39096.4 |
| phosphoglycerate kinase | BED45_11310 | Not Available | Negative | 321593 - 322756 | 41047.5 |
| erythrose-4-phosphate dehydrogenase | BED45_11315 | Not Available | Negative | 322796 - 323824 | 37466.8 |
| dna-binding protein | BED45_11320 | Not Available | Positive | 324199 - 324624 | 15273.4 |
| ecf transporter s component | BED45_11325 | Not Available | Positive | 324649 - 325227 | 20316.0 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

