Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Late competence protein | BED45_14405 | Not Available | Negative | 1052721 - 1053812 | 40345.7 |
| Portal protein | BED45_14410 | Not Available | Negative | 1054250 - 1055287 | 39283.6 |
| Terminase | BED45_14415 | Not Available | Negative | 1055287 - 1057056 | 66986.3 |
| Capsid scaffolding protein | BED45_14420 | Not Available | Positive | 1057221 - 1058084 | 31156.6 |
| Major capsid protein | BED45_14425 | Not Available | Positive | 1058116 - 1059266 | 42089.8 |
| Terminase | BED45_14430 | Not Available | Positive | 1059270 - 1060028 | 27586.6 |
| Head completion-stabilization protein | BED45_14435 | Not Available | Positive | 1060126 - 1060626 | 19096.9 |
| Tail protein | BED45_14440 | Not Available | Positive | 1060626 - 1060829 | 7061.38 |
| Holin | BED45_14445 | Not Available | Positive | 1060820 - 1061041 | 8375.43 |
| Prophage lysozyme | BED45_14450 | Not Available | Positive | 1061025 - 1061534 | 18557.6 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

