Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isopentenyl-diphosphate delta-isomerase | BED45_11125 | Not Available | Positive | 282967 - 283521 | 20753.6 |
| lysine--trna ligase | BED45_11130 | Not Available | Negative | 283599 - 285116 | 57688.7 |
| peptide chain release factor 2 | BED45_11135 | Not Available | Negative | 285126 - 286007 | 32810.3 |
| single-stranded-dna-specific exonuclease recj | BED45_11140 | Not Available | Negative | 286316 - 288049 | 63133.2 |
| bifunctional protein-disulfide isomerase/oxidoreductase dsbc | BED45_11145 | Not Available | Negative | 288055 - 288768 | 25936.5 |
| site-specific tyrosine recombinase xerd | BED45_11150 | Not Available | Negative | 288792 - 289688 | 34156.1 |
| flavodoxin fldb | BED45_11155 | Not Available | Positive | 289802 - 290323 | 19716.3 |
| hypothetical protein | BED45_11160 | Not Available | Negative | 290368 - 290775 | 15986.9 |
| hypothetical protein | BED45_11165 | Not Available | Negative | 290756 - 291022 | 10558.7 |
| pp_00288 | BED45_11170 | Not Available | Positive | 291279 - 292259 | Not Available |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

