Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BED45_11075 | Not Available | Negative | 275348 - 275629 | 10879.8 |
| hypothetical protein | BED45_11080 | Not Available | Negative | 275641 - 276402 | 28481.8 |
| integrase | BED45_11085 | Not Available | Positive | 278691 - 279269 | 21528.8 |
| hypothetical protein | BED45_11090 | Not Available | Positive | 279363 - 279560 | 7633.93 |
| hypothetical protein | BED45_11095 | Not Available | Positive | 279557 - 279850 | 11351.0 |
| hypothetical protein | BED45_11100 | Not Available | Positive | 279926 - 280195 | 9961.24 |
| hypothetical protein | BED45_11105 | Not Available | Negative | 280258 - 280755 | 18027.7 |
| hypothetical protein | BED45_11110 | Not Available | Negative | 280779 - 280982 | 7710.23 |
| Trna-gly | Not Available | Not Available | Positive | 281889 - 281962 | Not Available |
| hypothetical protein | BED45_11120 | Not Available | Negative | 282042 - 282800 | 26562.9 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

