Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | BED45_10925 | Not Available | Negative | 244653 - 245537 | 32789.3 |
| na(+)-translocating nadh-quinone reductase subunit e | BED45_10930 | Not Available | Positive | 245639 - 246094 | 17437.6 |
| transporter | BED45_10935 | Not Available | Positive | 246237 - 247466 | 44892.6 |
| transcriptional repressor rcnr to maintain nickel and cobalt homeostasis | BED45_10940 | Not Available | Negative | 248105 - 248377 | 10123.4 |
| nickel/cobalt efflux protein rcna | BED45_10945 | Not Available | Positive | 248498 - 249364 | 31499.3 |
| deaminase | BED45_10950 | Not Available | Negative | 249409 - 250791 | 50373.5 |
| carbamate kinase | BED45_10955 | Not Available | Negative | 250804 - 251754 | 33941.8 |
| xanthine permease | BED45_10960 | Not Available | Negative | 251781 - 253331 | 55130.0 |
| hypothetical protein | BED45_10965 | Not Available | Negative | 253449 - 254867 | 50917.6 |
| hypothetical protein | BED45_10970 | Not Available | Negative | 254867 - 256414 | 55408.0 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

