Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin triphosphate diphosphatase | BED45_10690 | Not Available | Negative | 180336 - 180779 | 16968.1 |
| aspartate--trna ligase | BED45_10695 | Not Available | Negative | 180781 - 182553 | 65683.9 |
| hydrolase | BED45_10700 | Not Available | Positive | 182842 - 183408 | 20524.5 |
| hypothetical protein | BED45_10705 | Not Available | Positive | 183731 - 184399 | 24907.5 |
| dna polymerase v | BED45_10710 | Not Available | Negative | 184400 - 184789 | 14403.1 |
| hypothetical protein | BED45_25835 | Not Available | Negative | 186303 - 187124 | 30956.1 |
| hypothetical protein | BED45_25840 | Not Available | Negative | 187492 - 188313 | 31105.3 |
| incfii family plasmid replication initiator repa | BED45_25845 | Not Available | Positive | 188464 - 189219 | 29044.1 |
| hypothetical protein | BED45_25850 | Not Available | Negative | 189631 - 189848 | 8287.03 |
| dde endonuclease | BED45_25855 | Not Available | Positive | 189834 - 190766 | 35720.3 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

