Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate kinase | BED45_10640 | Not Available | Positive | 170745 - 172187 | 51451.3 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | BED45_10645 | Not Available | Negative | 172232 - 173203 | 37364.5 |
| murein dd-endopeptidase mepm | BED45_10650 | Not Available | Negative | 173323 - 174579 | 46466.4 |
| zinc abc transporter substrate-binding protein | BED45_10655 | Not Available | Negative | 174658 - 175602 | 34162.5 |
| zinc abc transporter atp-binding protein znuc | BED45_10660 | Not Available | Positive | 175681 - 176436 | 27776.2 |
| zinc abc transporter permease | BED45_10665 | Not Available | Positive | 176433 - 177218 | 27759.4 |
| holliday junction dna helicase ruvb | BED45_10670 | Not Available | Negative | 177297 - 178307 | 37177.1 |
| holliday junction dna helicase ruva | BED45_10675 | Not Available | Negative | 178316 - 178927 | 22147.1 |
| crossover junction endodeoxyribonuclease ruvc | BED45_10680 | Not Available | Negative | 179008 - 179529 | 18779.9 |
| hypothetical protein | BED45_10685 | Not Available | Negative | 179564 - 180307 | 26485.0 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

