Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exodeoxyribonuclease x | BED45_10590 | Not Available | Positive | 159502 - 160164 | 25085.5 |
| oligopeptidase b | BED45_10595 | Not Available | Negative | 160155 - 162233 | 79612.4 |
| hypothetical protein | BED45_10600 | Not Available | Negative | 162296 - 162955 | 23780.4 |
| hypothetical protein | BED45_10605 | Not Available | Negative | 163050 - 163403 | 12955.4 |
| damage-inducible protein yebg | BED45_10610 | Not Available | Negative | 163525 - 163815 | 10651.4 |
| phosphoribosylglycinamide formyltransferase 2 | BED45_10615 | Not Available | Positive | 163947 - 165125 | 42454.1 |
| keto-deoxy-phosphogluconate aldolase | BED45_10620 | Not Available | Negative | 165193 - 165834 | 22232.2 |
| phosphogluconate dehydratase | BED45_10625 | Not Available | Negative | 165869 - 167680 | 64633.9 |
| glucose-6-phosphate dehydrogenase | BED45_10630 | Not Available | Negative | 167914 - 169389 | 55837.6 |
| transcriptional regulator hexr | BED45_10635 | Not Available | Positive | 169757 - 170626 | 32061.6 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

