Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BED45_10490 | Not Available | Negative | 140654 - 141445 | 27183.1 |
| pathogenicity island 1 effector protein sipb | BED45_10495 | Not Available | Negative | 141471 - 143249 | 63102.4 |
| cesd/sycd/lcrh family type iii secretion system chaperone | BED45_10500 | Not Available | Negative | 143230 - 143739 | 19866.2 |
| hypothetical protein | BED45_10505 | Not Available | Positive | 143944 - 144174 | 9055.83 |
| hypothetical protein | BED45_10510 | Not Available | Positive | 144210 - 145010 | 30155.7 |
| zinc metalloprotease htpx | BED45_10515 | Not Available | Negative | 145109 - 145990 | 31886.3 |
| c-terminal processing peptidase | BED45_10520 | Not Available | Negative | 146183 - 148231 | 76540.1 |
| rna chaperone proq | BED45_10525 | Not Available | Negative | 148251 - 148937 | 25398.4 |
| free methionine-r-sulfoxide reductase | BED45_10530 | Not Available | Negative | 149034 - 149531 | 18027.4 |
| hypothetical protein | BED45_10535 | Not Available | Positive | 149660 - 150943 | 48151.3 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

