Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escr/yscr/hrcr family type iii secretion system export apparatus protein | BED45_10395 | Not Available | Negative | 125115 - 125804 | 25249.0 |
| hypothetical protein | BED45_10400 | Not Available | Negative | 125814 - 126734 | 34318.5 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 127272 - 127379 | Not Available |
| hypothetical protein | BED45_10405 | Not Available | Negative | 126731 - 127654 | 33852.4 |
| hypothetical protein | BED45_10410 | Not Available | Negative | 127642 - 128091 | 17810.6 |
| escn/yscn/hrcn family type iii secretion system atpase | BED45_10415 | Not Available | Negative | 128081 - 129382 | 47310.9 |
| hypothetical protein | BED45_10420 | Not Available | Negative | 129382 - 129786 | 14687.4 |
| escv/yscv/hrcv family type iii secretion system export apparatus protein | BED45_10425 | Not Available | Negative | 129791 - 131821 | 75382.0 |
| hypothetical protein | BED45_10430 | Not Available | Negative | 131898 - 132146 | 9538.51 |
| type iii secretion system regulator inve | BED45_10435 | Not Available | Negative | 132139 - 132702 | 21717.0 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

