Citrobacter freundii str. CF8_ST22

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii strain CF8_ST22 is a Gram-negative, nonsporulating rod-shaped bacterium that thrives in diverse environments, including hospital sewage, the intestinal tract, sewage systems, soil, and surface waters. This microbe exhibits facultative anaerobic respiration, allowing it to survive in both aerobic and anaerobic conditions. C. freundii is a member of the Enterobacteriaceae family, which is commonly found in the intestinal microbiota of humans and animals, as well as in various environmental contexts. Its presence in hospital sewage highlights its ability to adapt to varying nutrient conditions and potentially serve as a bioindicator for monitoring microbial contamination in healthcare settings. The strain's ecological versatility suggests a significant role in nutrient cycling within the environments it inhabits, particularly in decomposition processes in soil and aquatic systems. Given the strain's isolated habitats, further investigations into its metabolic capabilities could unveil insights into its contributions to biogeochemical cycles or its interactions with other microbial communities. Overall, C. freundii strain CF8_ST22 serves as a pertinent example of how microorganisms can adapt to and thrive in varied ecological niches, emphasizing the importance of understanding their roles in both health and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii
StrainCF8_ST22

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii str. CF8_ST22
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital sewage; intestinal tract; sewage; soil; surface waters
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Oryctolagus cuniculus
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii strain CF8_ST22

Gene Summary

Adenine Count

1312762 bp

Thymine Count

1316688 bp

Guanine Count

1402969 bp

Cytosine Count

1407022 bp

Genome Length

5439441 bp

Protein-coding Genes

4889 genes

Non-Coding Genes

266 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBED45_10345Not AvailablePositive116765 - 1170048370.48
dna-binding transcriptional regulator kdgrBED45_10350Not AvailableNegative117119 - 11791030105.2
multidrug mfs transporterBED45_10355Not AvailablePositive118085 - 11945248009.4
hypothetical proteinBED45_10360Not AvailableNegative119516 - 1197227480.56
pathogenicity island 1 effector proteinBED45_10365Not AvailableNegative119732 - 12129757120.6
helix-turn-helix transcriptional regulatorBED45_10370Not AvailableNegative121478 - 12215825551.0
transglycosylase slt domain proteinBED45_10375Not AvailableNegative122297 - 12294724551.3
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinBED45_10380Not AvailableNegative122937 - 12407342947.6
esct/ysct/hrct family type iii secretion system export apparatus proteinBED45_10385Not AvailableNegative124079 - 12484027673.3
escs/yscs/hrcs family type iii secretion system export apparatus proteinBED45_10390Not AvailableNegative124851 - 1251119311.9

Displaying genes 311 – 320 of 5155 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infections in animalsCausesPMC6885840
Infections of the urinary and respiratory tracts in humansCausesPMC6885840
Respiratory tract and wound infections in horsesCausesPMC6885840
Respiratory tract infections in dogsCausesPMC6885840
Pleuritis and urinary tract infections in catsCausesPMC6885840
Bacterial infectionsCausesPMC7578172
Opportunistic infectionsCausesPMC12838003

Displaying health effects 1 – 7 of 7 in total