Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts mannose/fructose/sorbose transporter subunit iic | BED45_10300 | Not Available | Positive | 109079 - 109879 | 27510.4 |
| pts mannose transporter subunit iid | BED45_10305 | Not Available | Positive | 109892 - 110743 | 30872.4 |
| hypothetical protein | BED45_10310 | Not Available | Positive | 110804 - 111262 | 17826.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 111606 - 111789 | Not Available |
| hypothetical protein | BED45_10315 | Not Available | Positive | 111695 - 112261 | 20113.3 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | BED45_10320 | Not Available | Negative | 112258 - 113067 | 29891.8 |
| peptidoglycan synthase | BED45_10325 | Not Available | Negative | 113131 - 114876 | 63044.7 |
| cold-shock protein | BED45_10330 | Not Available | Negative | 115096 - 115305 | 7402.76 |
| hypothetical protein | BED45_10335 | Not Available | Negative | 116098 - 116382 | 10417.5 |
| phop regulon feedback inhibition membrane protein mgrb | BED45_10340 | Not Available | Negative | 116457 - 116600 | 5560.21 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

