Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Rnfh family protein | BED45_13680 | Not Available | Positive | 876503 - 876799 | 11017.4 |
| Outer membrane protein assembly factor bame | BED45_13685 | Not Available | Negative | 876850 - 877194 | 12506.0 |
| Dna repair protein recn | BED45_13690 | Not Available | Negative | 877344 - 879005 | 61423.2 |
| Dna repair protein recn | BED45_13695 | Not Available | Negative | 879091 - 879969 | 32543.3 |
| Heat shock protein | BED45_13700 | Not Available | Positive | 880092 - 880685 | 21745.9 |
| Hlyc/corc family transporter | BED45_13705 | Not Available | Negative | 880735 - 882024 | 48104.1 |
| Inner membrane protein ypjd | BED45_13710 | Not Available | Negative | 882043 - 882834 | 29202.8 |
| Signal recognition particle protein | BED45_13715 | Not Available | Positive | 883000 - 884361 | 49746.4 |
| Attr | Not Available | Not Available | Positive | 885663 - 885678 | Not Available |
| Anaerobic ribonucleoside-triphosphate reductase-activating protein | BED45_14355 | Not Available | Negative | 1045573 - 1046370 | 30193.0 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

