Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase small subunit | BED45_10165 | Not Available | Negative | 80965 - 82263 | 47470.0 |
| spovr family protein | BED45_10170 | Not Available | Positive | 82586 - 84118 | 60643.9 |
| fatty acid metabolism regulator | BED45_10175 | Not Available | Negative | 84221 - 84940 | 27054.2 |
| na+/h+ antiporter nhab | BED45_10180 | Not Available | Positive | 85177 - 86721 | 56638.5 |
| disulfide bond formation protein b | BED45_10185 | Not Available | Positive | 86863 - 87393 | 20064.2 |
| Ncrna_class:other | Not Available | Not Available | Positive | 87318 - 87454 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 87500 - 87636 | Not Available |
| cytoplasmic protein | BED45_10190 | Not Available | Positive | 87504 - 87845 | 12803.9 |
| hypothetical protein | BED45_10195 | Not Available | Negative | 87875 - 88321 | 17333.5 |
| isomerase/hydrolase | BED45_10200 | Not Available | Negative | 88414 - 89073 | 23708.6 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

