Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter atp-binding protein | BED45_10115 | Not Available | Positive | 70700 - 71461 | 27305.4 |
| methyltransferase | BED45_10120 | Not Available | Positive | 71471 - 72283 | 30986.0 |
| modd protein | BED45_10125 | Not Available | Positive | 72280 - 73137 | 30308.4 |
| tonb-dependent receptor | BED45_10130 | Not Available | Positive | 73161 - 75131 | 73218.5 |
| hypothetical protein | BED45_10135 | Not Available | Negative | 75173 - 75427 | 8613.09 |
| flagellar brake protein | BED45_10140 | Not Available | Positive | 75629 - 76363 | 27707.4 |
| lytic murein transglycosylase | BED45_10145 | Not Available | Negative | 76375 - 76986 | 22225.8 |
| muramoyltetrapeptide carboxypeptidase | BED45_10150 | Not Available | Positive | 77085 - 77999 | 33128.7 |
| k+/h+ antiporter | BED45_10155 | Not Available | Positive | 78097 - 79830 | 61992.8 |
| alanine racemase | BED45_10160 | Not Available | Negative | 79882 - 80952 | 38783.8 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

