Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein papd | BED45_10065 | Not Available | Positive | 57481 - 58203 | 25852.3 |
| fimbrial protein | BED45_10070 | Not Available | Positive | 58259 - 60544 | 81842.9 |
| spore coat protein u | BED45_10075 | Not Available | Positive | 60558 - 61526 | 33113.0 |
| glutamate dehydrogenase | BED45_10080 | Not Available | Positive | 61849 - 63123 | 46155.2 |
| dihydroxyacetone kinase subunit dhak | BED45_10085 | Not Available | Positive | 63449 - 64519 | 38280.6 |
| dihydroxyacetone kinase subunit l | BED45_10090 | Not Available | Positive | 64531 - 65163 | 22920.5 |
| dihydroxyacetone kinase subunit dham | BED45_10095 | Not Available | Positive | 65174 - 66604 | 50877.0 |
| alpha,alpha-trehalase | BED45_10100 | Not Available | Positive | 66775 - 68487 | 63670.9 |
| abc transporter atp-binding protein | BED45_10105 | Not Available | Positive | 68695 - 69717 | 37081.9 |
| peptide abc transporter substrate-binding protein | BED45_10110 | Not Available | Positive | 69717 - 70703 | 34729.0 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

