Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | BED45_09965 | Not Available | Positive | 36130 - 36981 | 30824.2 |
| ribose-phosphate pyrophosphokinase | BED45_09970 | Not Available | Positive | 37230 - 38195 | 34869.2 |
| c4-dicarboxylic acid transporter daua | BED45_09975 | Not Available | Positive | 38347 - 40002 | 58417.4 |
| 2,4-diaminobutyrate decarboxylase | BED45_09980 | Not Available | Negative | 40123 - 41586 | 53177.6 |
| diaminobutyrate--2-oxoglutarate transaminase | BED45_09985 | Not Available | Negative | 41602 - 42987 | 49619.3 |
| lysine-sensitive aspartokinase 3 | BED45_09990 | Not Available | Positive | 43596 - 44957 | 49204.7 |
| hypothetical protein | BED45_09995 | Not Available | Negative | 45072 - 45353 | 10529.9 |
| aminoacyl-trna hydrolase | BED45_10000 | Not Available | Positive | 45628 - 46212 | 21080.5 |
| redox-regulated atpase ychf | BED45_10005 | Not Available | Positive | 46328 - 47422 | 39703.6 |
| transcriptional regulator | BED45_10010 | Not Available | Negative | 47623 - 48618 | 36526.3 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

