Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| respiratory nitrate reductase subunit gamma | BED45_09870 | Not Available | Negative | 13849 - 14526 | 25518.9 |
| nitrate reductase molybdenum cofactor assembly chaperone | BED45_09875 | Not Available | Negative | 14526 - 15236 | 26475.2 |
| nitrate reductase subunit beta | BED45_09880 | Not Available | Negative | 15233 - 16771 | 57795.1 |
| nitrate reductase subunit alpha | BED45_09885 | Not Available | Negative | 16768 - 20511 | 140613.0 |
| nitrate/nitrite transporter | BED45_09890 | Not Available | Negative | 21026 - 22417 | 49664.2 |
| two-component system sensor histidine kinase narx | BED45_09895 | Not Available | Positive | 22758 - 24554 | 66972.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 23284 - 23660 | Not Available |
| two-component system response regulator narl | BED45_09900 | Not Available | Positive | 24547 - 25197 | 23849.2 |
| invasin | BED45_09905 | Not Available | Negative | 25219 - 26604 | 51513.1 |
| hypothetical protein | BED45_09910 | Not Available | Positive | 26780 - 27133 | 12578.4 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

