Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Amber mutation-suppressing protein | BED45_13630 | Not Available | Positive | 854324 - 854899 | 21615.6 |
| hypothetical protein | BED45_13635 | Not Available | Positive | 855540 - 856958 | 54313.4 |
| Cp4-57 prophage | BED45_13640 | Not Available | Negative | 856970 - 858169 | 44722.3 |
| Tmrna,resume; | Not Available | Not Available | Positive | 858354 - 858717 | Not Available |
| secretion protein hlyd | BED45_13650 | Not Available | Negative | 858790 - 859980 | 44117.3 |
| Abc transporter | BED45_13655 | Not Available | Negative | 859961 - 862147 | 80567.4 |
| type i secretion protein tolc | BED45_13660 | Not Available | Negative | 862144 - 863553 | 51508.9 |
| Hypothetical protein | BED45_13665 | Not Available | Negative | 863654 - 874855 | 374461.0 |
| Ssra-binding protein | BED45_13670 | Not Available | Negative | 875439 - 875921 | 18184.0 |
| Type ii toxin-antitoxin system toxin rata | BED45_13675 | Not Available | Positive | 876076 - 876519 | 16383.8 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

