Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | CF8_ST22 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1312762 bp
Thymine Count
1316688 bp
Guanine Count
1402969 bp
Cytosine Count
1407022 bp
Genome Length
5439441 bp
Protein-coding Genes
4889 genes
Non-Coding Genes
266 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | BED45_24285 | Not Available | Positive | 4203508 - 4204965 | 54932.4 |
| Hnh endonuclease | BED45_24290 | Not Available | Positive | 4204947 - 4205537 | 22180.4 |
| Hypothetical protein | BED45_24295 | Not Available | Positive | 4205534 - 4205875 | 12916.5 |
| Hypothetical protein | BED45_24300 | Not Available | Positive | 4205875 - 4206111 | 8918.7 |
| Terminase small subunit | BED45_24305 | Not Available | Positive | 4206263 - 4206748 | 18382.4 |
| Portal protein | BED45_24310 | Not Available | Positive | 4206755 - 4208269 | 55169.3 |
| Head portal protein | BED45_24315 | Not Available | Positive | 4208269 - 4209543 | 47179.2 |
| Head maturation protease | BED45_24320 | Not Available | Positive | 4209561 - 4210238 | 24378.8 |
| Major head subunit | BED45_24325 | Not Available | Positive | 4210241 - 4211398 | 42167.8 |
| Head-tail connector i | BED45_24330 | Not Available | Positive | 4211438 - 4211758 | 12271.5 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

