Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease | B9P90_02410 | Not Available | Positive | 488083 - 489027 | 34557.3 |
| spermidine/putrescine abc transporter permease | B9P90_02415 | Not Available | Positive | 489017 - 489823 | 29042.0 |
| 1-pyrroline dehydrogenase | B9P90_02420 | Not Available | Positive | 489845 - 491272 | 51006.1 |
| bcr/cfla family drug resistance efflux transporter | B9P90_02425 | Not Available | Negative | 491466 - 492593 | 40483.8 |
| arac family transcriptional regulator | B9P90_02430 | Not Available | Positive | 492695 - 493474 | 29520.5 |
| stress response membrane protein yncl | B9P90_02435 | Not Available | Negative | 493595 - 493690 | 3360.2 |
| duf2566 domain-containing protein | B9P90_02440 | Not Available | Positive | 493874 - 494056 | 7000.02 |
| virulence effector srfc | B9P90_02445 | Not Available | Negative | 494076 - 496238 | 81294.6 |
| virulence factor srfb | B9P90_02450 | Not Available | Negative | 496235 - 499216 | 110918.0 |
| ssrab-activated protein | B9P90_02455 | Not Available | Negative | 499221 - 500528 | 47025.7 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

