Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| benzoate transporter | B9P90_02360 | Not Available | Negative | 476947 - 478113 | 40055.3 |
| xre family transcriptional regulator | B9P90_02365 | Not Available | Positive | 478218 - 478754 | 19928.7 |
| protease | B9P90_02370 | Not Available | Positive | 478834 - 480795 | 72950.4 |
| duf2554 domain-containing protein | B9P90_02375 | Not Available | Negative | 480799 - 481029 | 8649.1 |
| duf2474 domain-containing protein | B9P90_02380 | Not Available | Negative | 481219 - 481344 | 4662.07 |
| cytochrome d ubiquinol oxidase subunit ii | B9P90_02385 | Not Available | Negative | 481344 - 482354 | 37031.3 |
| cytochrome ubiquinol oxidase subunit i | B9P90_02390 | Not Available | Negative | 482354 - 483757 | 51930.7 |
| gntr family transcriptional regulator | B9P90_02395 | Not Available | Positive | 484166 - 485575 | 53024.0 |
| spermidine/putrescine abc transporter substrate-binding protein | B9P90_02400 | Not Available | Positive | 485904 - 487049 | 42148.2 |
| abc transporter atp-binding protein | B9P90_02405 | Not Available | Positive | 487066 - 488082 | 37194.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

