Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid stabilization protein | B9P90_29945 | Not Available | Positive | 5780684 - 5781646 | 34337.1 |
| plasmid stability protein | B9P90_29950 | Not Available | Positive | 5781660 - 5782046 | 14337.3 |
| hypothetical protein | B9P90_29960 | Not Available | Positive | 5783958 - 5784419 | 18003.7 |
| isncy family transposase iskpn21 | B9P90_29965 | Not Available | Positive | 5784617 - 5786020 | 53501.2 |
| hypothetical protein | B9P90_29970 | Not Available | Negative | 5786049 - 5786681 | 24812.4 |
| is91 family transposase | B9P90_29975 | Not Available | Negative | 5787031 - 5788572 | 58501.3 |
| replicase | B9P90_29980 | Not Available | Positive | 5789060 - 5789249 | 6992.56 |
| replication initiation protein | B9P90_29985 | Not Available | Positive | 5789203 - 5789316 | 3986.52 |
| hypothetical protein | B9P90_29990 | Not Available | Positive | 5789624 - 5789926 | 10980.4 |
| rop family plasmid primer rna-binding protein | B9P90_29995 | Not Available | Positive | 5790181 - 5790369 | 7013.35 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

