Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dde transposase | B9P90_29775 | Not Available | Negative | 5748067 - 5751045 | 112444.0 |
| sprt domain-containing protein | B9P90_29780 | Not Available | Negative | 5751299 - 5752084 | 29716.9 |
| ardb protein | B9P90_29785 | Not Available | Positive | 5752264 - 5752686 | 16135.1 |
| hypothetical protein | B9P90_29790 | Not Available | Positive | 5752803 - 5752994 | 7384.8 |
| antirestriction protein ardr | B9P90_29795 | Not Available | Positive | 5752998 - 5753528 | 19694.2 |
| hypothetical protein | B9P90_29800 | Not Available | Negative | 5753882 - 5754106 | 8151.6 |
| tn3 family transposase | B9P90_29805 | Not Available | Negative | 5754329 - 5757334 | 113130.0 |
| is110 family transposase | B9P90_29810 | Not Available | Negative | 5757541 - 5758545 | 37469.7 |
| tn3 family transposase | B9P90_29815 | Not Available | Negative | 5758624 - 5760450 | 68077.5 |
| plasmid recombination enzyme family protein | B9P90_29820 | Not Available | Negative | 5760451 - 5760913 | 17936.4 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

