Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| killer protein | B9P90_29355 | Not Available | Positive | 5689365 - 5689646 | 10455.7 |
| replication initiation protein | B9P90_29360 | Not Available | Negative | 5690103 - 5690249 | 5463.56 |
| plasmid replication initiation protein | B9P90_29370 | Not Available | Negative | 5690597 - 5690713 | 4371.46 |
| plasmid mobilization relaxosome protein mobc | B9P90_29375 | Not Available | Positive | 5690866 - 5691210 | 12802.6 |
| conjugal transfer protein trag | B9P90_29380 | Not Available | Positive | 5691279 - 5694063 | 98148.2 |
| permease | B9P90_29385 | Not Available | Negative | 5694101 - 5694463 | 13361.5 |
| nucleotide excision repair protein | B9P90_29390 | Not Available | Positive | 5695179 - 5695451 | 10517.7 |
| transglycosylase | B9P90_29395 | Not Available | Positive | 5695451 - 5695984 | 19354.0 |
| hypothetical protein | B9P90_29410 | Not Available | Positive | 5696776 - 5697027 | 8787.73 |
| abc transporter permease | B9P90_29415 | Not Available | Positive | 5697141 - 5698286 | 41191.3 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

