Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative lateral flagellar export/assembly protein lafu | B9P90_28845 | Not Available | Negative | 5609628 - 5610626 | 37002.9 |
| flagellar motor stator protein mota | B9P90_28850 | Not Available | Negative | 5610629 - 5611492 | 31242.0 |
| flia/whig family rna polymerase sigma factor | B9P90_28855 | Not Available | Negative | 5611522 - 5612238 | 27536.0 |
| flagellar basal body protein flil | B9P90_28860 | Not Available | Negative | 5612259 - 5612729 | 17378.0 |
| flagellar hook-length control protein flik | B9P90_28865 | Not Available | Negative | 5612737 - 5613909 | 41356.9 |
| flagellar protein flit | B9P90_28870 | Not Available | Negative | 5613906 - 5614223 | 12621.2 |
| flagellar export chaperone flis | B9P90_28875 | Not Available | Negative | 5614228 - 5614620 | 14666.5 |
| flagellar hook protein | B9P90_28880 | Not Available | Negative | 5614654 - 5615955 | 45711.4 |
| flagellin | B9P90_28885 | Not Available | Negative | 5616156 - 5617058 | 31163.1 |
| dna-binding protein | B9P90_28895 | Not Available | Positive | 5618354 - 5618674 | 11890.3 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

