Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | B9P90_28195 | Not Available | Negative | 5483086 - 5484210 | 41987.0 |
| duf4154 domain-containing protein | B9P90_28200 | Not Available | Negative | 5484520 - 5485038 | 19033.2 |
| hypothetical protein | B9P90_28205 | Not Available | Negative | 5485197 - 5485571 | 13882.2 |
| 3-deoxy-7-phosphoheptulonate synthase | B9P90_28210 | Not Available | Positive | 5485787 - 5486857 | 38893.3 |
| bifunctional chorismate mutase/prephenate dehydrogenase | B9P90_28215 | Not Available | Positive | 5486868 - 5487989 | 41961.7 |
| bifunctional chorismate mutase/prephenate dehydratase | B9P90_28220 | Not Available | Negative | 5488086 - 5489246 | 42930.6 |
| ribosomal subunit interface protein | B9P90_28225 | Not Available | Negative | 5489497 - 5489835 | 12696.2 |
| hypothetical protein | B9P90_28230 | Not Available | Negative | 5489910 - 5490092 | 6870.35 |
| outer membrane protein assembly factor bamd | B9P90_28235 | Not Available | Negative | 5490104 - 5490841 | 27785.9 |
| 23s rrna pseudouridine(1911/1915/1917) synthase | B9P90_28240 | Not Available | Positive | 5490973 - 5491953 | 37135.9 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

