Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system permease/atpase | B9P90_27915 | Not Available | Positive | 5435063 - 5437249 | 80554.4 |
| secretion protein hlyd | B9P90_27920 | Not Available | Positive | 5437230 - 5438420 | 44135.3 |
| Tmrna,resume consensus sequence (at 84): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 5438493 - 5438856 | Not Available |
| hypothetical protein | B9P90_27930 | Not Available | Positive | 5439155 - 5439418 | 9973.55 |
| conjugal transfer protein | B9P90_27940 | Not Available | Negative | 5442112 - 5442390 | 9822.97 |
| transglycosylase | B9P90_27945 | Not Available | Negative | 5442390 - 5443055 | 24171.7 |
| hypothetical protein | B9P90_27950 | Not Available | Negative | 5443146 - 5443367 | 8024.42 |
| conjugal transfer protein trar | B9P90_27955 | Not Available | Negative | 5443733 - 5443948 | 8373.11 |
| hypothetical protein | B9P90_27960 | Not Available | Negative | 5443938 - 5444525 | 22012.4 |
| dna-binding protein | B9P90_27965 | Not Available | Negative | 5444539 - 5444733 | 7505.23 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

