Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trak | B9P90_26620 | Not Available | Positive | 5165744 - 5165962 | 8160.03 |
| conjugal transfer protein traj | B9P90_26625 | Not Available | Positive | 5165962 - 5167494 | 57916.2 |
| conjugative relaxase | B9P90_26630 | Not Available | Positive | 5167499 - 5170717 | 118903.0 |
| hypothetical protein | B9P90_26635 | Not Available | Positive | 5170714 - 5171379 | 24982.8 |
| transposase | B9P90_26640 | Not Available | Positive | 5171372 - 5171734 | 13634.7 |
| hypothetical protein | B9P90_26645 | Not Available | Negative | 5172354 - 5172665 | 11865.2 |
| endonuclease | B9P90_26650 | Not Available | Negative | 5172662 - 5173189 | 19554.4 |
| conjugal transfer protein trag | B9P90_26655 | Not Available | Negative | 5173186 - 5174187 | 37487.2 |
| conjugal transfer protein traf | B9P90_26660 | Not Available | Negative | 5174238 - 5175371 | 40111.9 |
| conjugal transfer protein trao | B9P90_26665 | Not Available | Negative | 5175371 - 5176258 | 33175.3 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

