Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | B9P90_00595 | Not Available | Negative | 117567 - 118718 | 42973.6 |
| acetate coa-transferase ydif | B9P90_00600 | Not Available | Negative | 118732 - 120327 | 57313.1 |
| 3-dehydroquinase | B9P90_00605 | Not Available | Negative | 120483 - 121241 | 27390.2 |
| quinate/shikimate dehydrogenase | B9P90_00610 | Not Available | Negative | 121278 - 122144 | 31265.8 |
| mfs transporter | B9P90_00615 | Not Available | Negative | 122166 - 123401 | 44816.4 |
| mfs transporter | B9P90_00620 | Not Available | Negative | 123643 - 124863 | 44572.6 |
| hypothetical protein | B9P90_00625 | Not Available | Negative | 124912 - 125268 | 13937.7 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 125426 - 125533 | Not Available |
| hypothetical protein | B9P90_00635 | Not Available | Negative | 125718 - 126827 | 39714.5 |
| fad-binding oxidoreductase | B9P90_00640 | Not Available | Positive | 127041 - 130097 | 113491.0 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

