Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine kinase | B9P90_25290 | Not Available | Positive | 4960871 - 4961812 | 33721.1 |
| pseudouridine-5-phosphate glycosidase | B9P90_25295 | Not Available | Positive | 4961800 - 4962735 | 33047.0 |
| nupc/nupg family nucleoside cnt transporter | B9P90_25300 | Not Available | Positive | 4962832 - 4964082 | 43536.6 |
| kinase | B9P90_25305 | Not Available | Negative | 4964129 - 4965217 | 39985.9 |
| deoxyribonuclease iv | B9P90_25310 | Not Available | Negative | 4965220 - 4966077 | 31549.3 |
| hypothetical protein | B9P90_25315 | Not Available | Negative | 4966149 - 4967198 | 36888.5 |
| lysr family transcriptional regulator | B9P90_25320 | Not Available | Positive | 4967377 - 4968258 | 32634.4 |
| lysine transporter | B9P90_25325 | Not Available | Positive | 4968454 - 4969923 | 53657.1 |
| ligand-gated channel protein | B9P90_25330 | Not Available | Negative | 4969988 - 4971973 | 73185.9 |
| mfs transporter | B9P90_25335 | Not Available | Negative | 4972307 - 4973629 | 48648.4 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

