Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | B9P90_25140 | Not Available | Positive | 4932607 - 4933671 | 39320.6 |
| endonuclease v | B9P90_25145 | Not Available | Positive | 4933681 - 4934361 | 24845.3 |
| hypothetical protein | B9P90_25150 | Not Available | Positive | 4934395 - 4934985 | 22675.0 |
| dna-binding protein hu-alpha | B9P90_25155 | Not Available | Positive | 4935172 - 4935444 | 9521.48 |
| hypothetical protein | B9P90_25160 | Not Available | Positive | 4935456 - 4936148 | 26226.7 |
| zinc resistance protein | B9P90_25165 | Not Available | Negative | 4936210 - 4936653 | 15731.7 |
| hypothetical protein | B9P90_25170 | Not Available | Negative | 4936672 - 4936860 | 7110.4 |
| sensor protein zras | B9P90_25175 | Not Available | Positive | 4936918 - 4938303 | 50885.6 |
| sigma-54-dependent fis family transcriptional regulator | B9P90_25180 | Not Available | Positive | 4938309 - 4939634 | 48595.0 |
| phosphoribosylamine--glycine ligase | B9P90_25185 | Not Available | Negative | 4939631 - 4940920 | 45831.6 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

