Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail tube protein | B9P90_12370 | Not Available | Positive | 2488339 - 2488713 | 13676.2 |
| hypothetical protein | B9P90_12375 | Not Available | Positive | 2488714 - 2489106 | 14313.7 |
| Tail length tape measure protein | B9P90_12380 | Not Available | Positive | 2489241 - 2491481 | 79303.0 |
| Tail/dna circulation protein | B9P90_12385 | Not Available | Positive | 2491478 - 2492809 | 48007.5 |
| Tail protein p | B9P90_12390 | Not Available | Positive | 2492793 - 2494010 | 44590.5 |
| Phage-related baseplate assembly protein gp45 | B9P90_12395 | Not Available | Positive | 2493994 - 2494599 | 22308.3 |
| Hypothetical protein | B9P90_12400 | Not Available | Positive | 2494689 - 2495039 | 12981.6 |
| Baseplate j protein | B9P90_12405 | Not Available | Positive | 2495039 - 2496106 | 37911.9 |
| Tail protein | B9P90_12410 | Not Available | Positive | 2496103 - 2496675 | 21409.2 |
| Tail fiber protein | B9P90_12415 | Not Available | Positive | 2496675 - 2497061 | 13342.9 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

