Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagella biosynthesis regulator | B9P90_04160 | Not Available | Positive | 852158 - 853159 | 37018.7 |
| arabinose transporter | B9P90_04165 | Not Available | Negative | 853156 - 854334 | 40678.9 |
| beta-ketoacyl-[acyl-carrier-protein] synthase i | B9P90_04170 | Not Available | Negative | 854548 - 855762 | 42257.4 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | B9P90_04175 | Not Available | Positive | 855922 - 857922 | 73189.9 |
| hypothetical protein | B9P90_04180 | Not Available | Negative | 858037 - 858312 | 9969.63 |
| elongation factor p hydroxylase | B9P90_04185 | Not Available | Negative | 858345 - 858893 | 21334.9 |
| hypothetical protein | B9P90_04190 | Not Available | Negative | 858893 - 859702 | 28651.1 |
| penicillin-insensitive murein endopeptidase | B9P90_04195 | Not Available | Negative | 859702 - 860526 | 30216.4 |
| chorismate synthase | B9P90_04200 | Not Available | Negative | 860530 - 861615 | 39098.8 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | B9P90_04205 | Not Available | Negative | 861655 - 862587 | 35162.7 |
Pathways
1235 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

