Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | c196 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1416802 bp
Thymine Count
1409964 bp
Guanine Count
1501215 bp
Cytosine Count
1514219 bp
Genome Length
5842230 bp
Protein-coding Genes
5411 genes
Non-Coding Genes
392 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | B9P90_03210 | Not Available | Negative | 651067 - 652350 | 45973.2 |
| phosphoserine transaminase | B9P90_03215 | Not Available | Negative | 652420 - 653508 | 39721.4 |
| duf421 domain-containing protein | B9P90_03220 | Not Available | Negative | 653721 - 654413 | 26046.2 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | B9P90_03225 | Not Available | Positive | 654550 - 656310 | 65560.0 |
| formate transporter foca | B9P90_03230 | Not Available | Positive | 656673 - 657572 | 32541.5 |
| formate acetyltransferase | B9P90_03235 | Not Available | Positive | 657632 - 659914 | 85014.4 |
| pyruvate formate lyase-activating protein | B9P90_03240 | Not Available | Positive | 660100 - 660840 | 28280.9 |
| amino acid permease | B9P90_03245 | Not Available | Negative | 660884 - 662305 | 52284.4 |
| mfs transporter | B9P90_03250 | Not Available | Negative | 662519 - 663667 | 41525.4 |
| hydrolase | B9P90_03255 | Not Available | Positive | 664053 - 664679 | 23075.5 |
Pathways
22 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

