BacMap pathways

Pathways for Stigmatella aurantiaca DW4/3-1 gsam_325

Search and browse metabolic pathways associated with this bacterium.

1330 pathways

Displaying pathways 1326–1330 of 1330

ThumbnailPathwayIdentifiersDescription
Ursocholic Acid  biosynthesis (hdh operon) thumbnail
Ursocholic Acid biosynthesis (hdh operon)
SMPDBPBK0650082
PathWhizPW687953
The biosynthesis of ursocholic acid, a secondary bile acid, is closely associated with the enzymatic activities encoded by the hdh operon in Clostridium absonum. This operon includes two contiguous genes: hdhA, encoding the 7?-hydroxysteroid dehydrogenase (7?-HSDH), and hdhB, coding for the 7?-hydroxysteroid dehydrogenase (7?-HSDH). The process begins with the enzyme 7?-HSDH, which catalyzes the oxidation of cholic acid (CA) at the 7?-hydroxy position, converting it into a 7-keto intermediate. Subsequently, the 7?-HSDH reduces this keto intermediate, but in a stereoselective manner that introduces a 7?-hydroxy group, resulting in the formation of ursocholic acid. The operon appears to be co-regulated, facilitating a coordinated response to bile acids, with promoter and regulatory sequences identified upstream of hdhA and hdhB. The biosynthetic pathway mediated by this operon exemplifies a stereospecific transformation that alters the aromatic configuration of bile acids, enabling bacteria like C. absonum to produce functionally diverse secondary bile acids such as ursocholic acid, which play pivotal roles in host-microbiome interactions and possess potential therapeutic properties.
ursodeoxycholic acid secondary bile acid biosynthesis (hdh operon) thumbnail
ursodeoxycholic acid secondary bile acid biosynthesis (hdh operon)
SMPDBPBK0650330
PathWhizPW688109
The biosynthesis of ursocholic acid, a secondary bile acid, is closely associated with the enzymatic activities encoded by the hdh operon in Clostridium absonum. This operon includes two contiguous genes: hdhA, encoding the 7?-hydroxysteroid dehydrogenase (7?-HSDH), and hdhB, coding for the 7?-hydroxysteroid dehydrogenase (7?-HSDH). The process begins with the enzyme 7?-HSDH, which catalyzes the oxidation of cholic acid (CA) at the 7?-hydroxy position, converting it into a 7-keto intermediate. Subsequently, the 7?-HSDH reduces this keto intermediate, but in a stereoselective manner that introduces a 7?-hydroxy group, resulting in the formation of ursocholic acid. The operon appears to be co-regulated, facilitating a coordinated response to bile acids, with promoter and regulatory sequences identified upstream of hdhA and hdhB. The biosynthetic pathway mediated by this operon exemplifies a stereospecific transformation that alters the aromatic configuration of bile acids, enabling bacteria like C. absonum to produce functionally diverse secondary bile acids such as ursocholic acid, which play pivotal roles in host-microbiome interactions and possess potential therapeutic properties.
Vitamin B1/Thiamine Biosynthesis thumbnail
Vitamin B1/Thiamine Biosynthesis
SMPDBSMP0000911
PathWhizPW000892
No description available
Vitamin B6  Metabolism thumbnail
Vitamin B6 Metabolism
SMPDBSMP0000910
PathWhizPW000891
No description available
Xylose Degradation I thumbnail
Xylose Degradation I
SMPDBSMP0002117
PathWhizPW002105
No description available

Displaying pathways 1326–1330 of 1330