Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_00021 | Q2FEV0 | Positive | 24348 - 24797 | 15478.3 |
| hypothetical protein | Rxycam_00022 | Not Available | Positive | 24798 - 25130 | 11708.0 |
| hypothetical protein | Rxycam_00023 | Q9I5W9 | Positive | 26277 - 26438 | 5912.79 |
| hypothetical protein | Rxycam_00024 | Not Available | Negative | 26480 - 26851 | 14083.9 |
| hypothetical protein | Rxycam_00025 | P53285 | Negative | 26940 - 28781 | 69372.4 |
| hypothetical protein | Rxycam_00026 | Not Available | Negative | 28778 - 29251 | 16805.8 |
| hypothetical protein | Rxycam_00027 | Not Available | Positive | 29425 - 29733 | 11891.2 |
| hypothetical protein | Rxycam_00028 | Not Available | Positive | 29734 - 30105 | 13991.0 |
| rna polymerase sigma factor siga | Rxycam_00029 | O66381 | Negative | 30181 - 31050 | 32930.9 |
| hypothetical protein | Rxycam_00030 | O32237 | Negative | 31243 - 31731 | 18273.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
