Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rxycam_00001 | Not Available | Negative | 7 - 5841 | 207425.0 |
| is701 family transposase iscarn75 | Rxycam_00002 | Q00461 | Positive | 6208 - 7443 | 46343.9 |
| hypothetical protein | Rxycam_00003 | Not Available | Negative | 7357 - 8025 | 22936.5 |
| cytochrome b6-f complex iron-sulfur subunit | Rxycam_00004 | I3R9N2 | Positive | 8444 - 8971 | 18780.2 |
| hypothetical protein | Rxycam_00005 | Not Available | Negative | 9019 - 10164 | 40086.1 |
| hypothetical protein | Rxycam_00006 | P9WMN6 | Negative | 10252 - 10755 | 17579.9 |
| hypothetical protein | Rxycam_00007 | Not Available | Negative | 10752 - 11243 | 16694.7 |
| phosphoglycerol transferase i | Rxycam_00008 | P54496 | Positive | 11366 - 13282 | 71161.5 |
| hypothetical protein | Rxycam_00009 | O34611 | Positive | 13548 - 15152 | 58294.4 |
| hypothetical protein | Rxycam_00010 | Not Available | Negative | 15202 - 15384 | 6147.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
