Kingdom
Bacillati
Phylum
Actinomycetota
Class
Rubrobacteria
Order
Rubrobacterales
Family
Rubrobacteraceae
Genus
Rubrobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Rubrobacteria |
| Order | Rubrobacterales |
| Family | Rubrobacteraceae |
| Genus | Rubrobacter |
| Species | Rubrobacter xylanophilus |
| Strain | PRD-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 60 |
| Temperature range | thermophilic |
| Habitat | Arima Onsen; hot spring; nonvolcanic Arima Onsen (hot spring) |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles - Pairs |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
488973 bp
Thymine Count
493569 bp
Guanine Count
1071447 bp
Cytosine Count
1071596 bp
Genome Length
3127021 bp
Protein-coding Genes
3145 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cadmium, cobalt and zinc/h(+)-k(+) antiporter | Rxycam_00011 | P94178 | Negative | 15421 - 16428 | 36164.6 |
| hypothetical protein | Rxycam_00012 | Q4V887 | Negative | 16523 - 17254 | 25542.3 |
| hypothetical protein | Rxycam_00013 | Not Available | Negative | 18207 - 18425 | 8422.07 |
| hypothetical protein | Rxycam_00014 | Not Available | Negative | 18415 - 18786 | 13804.7 |
| hypothetical protein | Rxycam_00015 | Not Available | Negative | 18780 - 18887 | 4041.52 |
| hypothetical protein | Rxycam_00016 | Not Available | Negative | 18907 - 20865 | 70494.5 |
| hypothetical protein | Rxycam_00017 | Not Available | Negative | 21104 - 21361 | 9807.14 |
| hypothetical protein | Rxycam_00018 | Not Available | Negative | 22217 - 23032 | 28814.7 |
| hypothetical protein | Rxycam_00019 | Not Available | Negative | 23046 - 23366 | 12056.6 |
| ecf rna polymerase sigma factor sige | Rxycam_00020 | A0R2D4 | Negative | 23363 - 23917 | 20872.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
